BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G06SP1|AL426414
(634 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 1081 0.0
>3x_Contig1638
Length = 14042
Score = 1081 bits (534), Expect = 0.0
Identities = 600/633 (94%), Gaps = 2/633 (0%)
Strand = Plus / Plus
Query: 1 catataacggtntatcttccctctagttgcatatctaggaatatctgacgattttcggag 60
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9410 catataacggtgtatcttccctctagttgcatatct-ggaatatctgacgattttcggag 9468
Query: 61 aattttggagaaaaakaaacttttcggaaaawctaggwtkctgcaccagakataagywgt 120
||||||||||||||| ||||||||||||||| ||||| |||||||||| ||||| |
Sbjct: 9469 aattttggagaaaaagaaacttttcggaaaaactaggaggctgcaccagagataagcaga 9528
Query: 121 gataagacgttgctatatattwcccgggacaatatatgcattctaggtcatgtgactgga 180
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9529 gagaagacgttgctatatattacccgggacaatatatgcattctaggtcatgtgactgga 9588
Query: 181 agcttccctctctggttgtcatttcggagttttcktttatttygtcktttwtwcakgaat 240
|||||||||||||||||||||| ||||||||| | | | || ||| ||| | || ||||
Sbjct: 9589 agcttccctctctggttgtcatgtcggagtttgcgctcaattcgtcgtttatacaggaat 9648
Query: 241 ctattttktwcatagtggattctcttaatctacgccgagattgttgaaaccggacctgka 300
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9649 ctattttgtacatagtggattctcttaatctacgccgagattgttgaaaccggacctgga 9708
Query: 301 tttggccctcattctttctatacgtgcctttaattggttcgtaacttctgcagctcgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9709 tttggccctcattctttctatacgtgcctttaattggttcgtaacttctgcagctcgttt 9768
Query: 361 ccacgattcctcttkcaacatatggttgttcaagtttagggaattgacacgtctaggtag 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9769 ccacgattcctcttgcaacatatggttgttcaagtttagggaattgacacgtctaggtag 9828
Query: 421 atcktcgctactttcactaggcgatctgaccctttgaggagtcttagcatttttagtaga 480
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 9829 atcgtcgctactttcactaggcgatctgaccctttgaggagtcgtagcatttttagtaga 9888
Query: 481 tctcagaggtgataaggtagttgctgttaatcttcctctgctaatggacgaggatatggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9889 tctcagaggtgataaggtagttgctgttaatcttcctctgctaatggacgaggatatggg 9948
Query: 541 tgaatctgttgacatggtatcggaagtaccgcccgtcagtttactctctaactccttgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9949 tgaatctgttgacatggtatcggaagtaccgcccgtcagtttactctctaactccttgat 10008
Query: 601 ctttaaattcttagckttctatttgatccttcg 633
||||||||||||||| ||| | |||||||||||
Sbjct: 10009 ctttaaattcttagcgttc-aattgatccttcg 10040
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2714
Number of Sequences: 1807
Number of extensions: 2714
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 634
length of database: 10,358,551
effective HSP length: 16
effective length of query: 618
effective length of database: 10,329,639
effective search space: 6383716902
effective search space used: 6383716902
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)